Keeping up with Genome Sequence and Expression

Book Series: Advances in Genome Sciences

Volume 3

by

Christian Neri

DOI: 10.2174/97816080582041140301
eISBN: 978-1-60805-820-4, 2014
ISBN: 978-1-60805-821-1
ISSN: 2213-6606 (Print)



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Genome science or genomics is essential to advancing knowledge in the fields of biology and medicine. Specifically, researchers learn ...[view complete introduction]

Table of Contents

Preface

- Pp. i

Christian Neri

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List of Contributors

- Pp. ii-vi (5)

Christian Neri

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Modeling Copy Number Variations in the Mouse

- Pp. 3-32 (30)

Yann Hérault, Arnaud Duchon, Damien Maréchal and Véronique Brault

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Estrogen Regulation of microRNA Expression

- Pp. 33-82 (50)

Tissa T. Manavalan and Carolyn M. Klinge

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Update on Basic and Applied Aspects of Genome Analysis of Lactic Acid-Producing Bacteria, Including Bifidobacteria

- Pp. 83-126 (44)

Baltasar Mayo, Douwe van Sinderen and Marco Ventura

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Recent Genomic Advances for Weed Science

- Pp. 127-142 (16)

David Horvath

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Oncogenomic Approaches in Exploring Gain of Function of Mutant p53

- Pp. 143-160 (18)

Sara Donzelli, Francesca Biagioni, Francesca Fausti, Sabrina Strano, Giulia Fontemaggi and Giovanni Blandino

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DNA Instability at Chromosomal Fragile Sites in Cancer

- Pp. 161-188 (28)

Laura W. Dillon, Allison B. Weckerle and Yuh-Hwa Wang

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Unraveling the Origin of Aneuploidy: Role of Epigenetic Marks

- Pp. 189-212 (24)

Diddier Prada, Marco A. Andonegui and Luis A. Herrera

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TWIST1 Gene: First Insights in Felis Catus

- Pp. 213-232 (20)

Cláudia S. Baptista, Sara Santos, Estela Bastos, Henrique Guedes-Pinto, Ivo G. Gut, Fátima Gärtner and Raquel Chaves

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Advances in the Study of Brain Aging and Alzheimer’s Disease Using Microarray and Next-Generation Sequencing: Focus on Selective Neuronal Vulnerability

- Pp. 233-270 (38)

Xinkun Wang, Mary L. Michaelis and Elias K. Michaelis

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Investigating Molecular Mechanisms of Chronic Pain in the Anterior Cingulate Cortex Through Genetically Engineered Mice

- Pp. 271-287 (17)

Susan S. Kim, Giannina Descalzi and Min Zhuo

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Index

- Pp. 288-302 (15)

Christian Neri

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Preface

Genome science or genomics is essential to advancing knowledge in the fields of biology and medicine. Specifically, researchers learn about the molecular biology behind genetic expression in living organisms and related methods of treating human genetic diseases (including gene therapy). Advances in Genome Science is an eBook series which provides a multi-disciplinary view of some of the latest developments in genome research, allowing readers to capture the essentiality and diversity of genomics in contemporary science.

The third volume of this eBook series contains a selection of articles illustrating how genome sequencing and the study of genome structure and epigenetic regulation remain at the center of some of the most exciting developments in the fields of biology as well as human disease research.

Christian Neri
Research Director at INSERM
Laboratory of Neuronal Cell Biology & Pathology
Psychiatry and Neuroscience Center U894
2 ter rue d'Alesia 75014 Paris
France

List of Contributors

Editor(s):
Christian Neri
Research Director at INSERM
INSTITUTE OF BIOLOGY PARIS-SEINE (IBPS)
CNRS UMR8256 Biology of Adaptation and Aging Team Neuronal Cell Biology & Pathology
University Pierre and Marie Curie
9 Quai St Bernard
Paris, 75005
France




Contributor(s):
Allison B. Weckerle
Department of Biochemistry
Wake Forest School of Medicine
Medical Center Boulevard
Winston-Salem
NC, 27157-1016
USA


Arnaud Duchon
Institute of Molecular Genetics and Cell Biology (IGBMC)
INSERM U964, CNRS UMR7104
University of Strasbourg
Illkirch
France


Baltasar Mayo
Department of Microbiology and Biochemistry
Dairy Research Institute of Asturias Principality (IPLA-CSIC)
Villaviciosa, Asturias
Spain


Carolyn M. Klinge
Department of Biochemistry & Molecular Biology
Center for Genetics and Molecular Medicine
University of Louisville School of Medicine
Louisville
KY, 40292
USA


Cláudia S. Baptista
Department of Veterinary Clinics
Institute of Biomedical Sciences Abel Salazar
University of Porto (ICBAS-UP)
Porto
Portugal


Damien Maréchal
Institute of Molecular Genetics and Cell Biology (IGBMC)
INSERM U964, CNRS UMR7104
University of Strasbourg
Illkirch
France


David Horvath
USDA-ARS, Bioscience Research Laboratory
1605 Albrecht Blvd. Fargo
ND, 58105
USA


Diddier Prada
Unidad de Investigación Biomédica en Cáncer-Instituto Nacional de Cancerología-Instituto de Investigaciones Biomédicas
Universidad Nacional Autónoma de México (UNAM)
Mexico City
Mexico


Douwe van Sinderen
Department of Microbiology
University College Cork
Cork
Ireland


Elias K. Michaelis
Higuchi Biosciences Center and Department of Pharmacology and Toxicology
The University of Kansas
Lawrence
KS, 66047
USA


Estela Bastos
Institute for Biotechnology and Bioengineering
Centre of Genomics and Biotechnology
University of Trás-os-Montes and Alto Douro (IBB/CGB-UTAD)
Vila Real
Portugal


Fátima Gärtner
Department of Pathology and Molecular Immunology
Institute of Biomedical Sciences Abel Salazar (ICBAS)
University of Porto
Porto
Portugal
/
Institute of Pathology and Immunology (IPATIMUP)
University of Porto
Porto
Portugal


Abel Salazar
(ICBAS), University of Porto, Porto
Portugal and Institute of Pathology and Immunology (IPATIMUP)
University of Porto
Porto
Portugal


Francesca Biagioni
Translational Oncogenomics Unit
National Cancer Institute Regina Elena Rome
Italy


Francesca Fausti
Translational Oncogenomics Unit
National Cancer Institute Regina Elena Rome
Italy


Giannina Descalzi
Department of Physiology, Faculty of Medicine
University of Toronto Centre for the Study of Pain
1 King’s College Circle
Toronto
Ontario
Canada


Giovanni Blandino
Translational Oncogenomics Unit
National Cancer Institute Regina Elena Rome
Italy


Giulia Fontemaggi
General Pathology Section, Department of Clinical and Experimental Medicine
Perugia University
Perugia
Italy


Henrique Guedes-Pinto
Institute for Biotechnology and Bioengineering
Centre of Genomics and Biotechnology
University of Trás-os-Montes and Alto Douro (IBB/CGB-UTAD)
Vila Real
Portugal


Ivo G. Gut
CEA/DSV/IG-Centre National de Génotypage
Evry Cedex
France


Laura W. Dillon
Department of Biochemistry
Wake Forest School of Medicine
Medical Center Boulevard
Winston-Salem
NC, 27157-1016
USA


Luis A. Herrera
Unidad de Investigación Biomédica en Cáncer-Instituto Nacional de Cancerología-Instituto de Investigaciones Biomédicas
Universidad Nacional Autónoma de México (UNAM)
Mexico City
Mexico


Marco A. Andonegui
Unidad de Investigación Biomédica en Cáncer-Instituto Nacional de Cancerología-Instituto de Investigaciones Biomédicas
Universidad Nacional Autónoma de México (UNAM)
Mexico City
Mexico


Marco Ventura
Laboratory of Probiogenomics, Department of Genetics
Biology of Microorganisms, Anthropology and Evolution
University of Parma
Italy


Mary L. Michaelis
Higuchi Biosciences Center and Department of Pharmacology and Toxicology
The University of Kansas
Lawrence
KS, 66047
USA


Min Zhuo
Department of Physiology, Faculty of Medicine
University of Toronto Centre for the Study of Pain
1 King’s College Circle
Toronto
Ontario
Canada
/
Department of Brain and Cognitive Sciences
Seoul National University
Seoul, 151-746
Korea


Raquel Chaves
Institute for Biotechnology and Bioengineering
Centre of Genomics and Biotechnology
University of Trás-os-Montes and Alto Douro (IBB/CGB-UTAD)
Vila Real
Portugal


Sabrina Strano
Molecular Chemoprevention Group
Scientific Direction
National Cancer Institute Regina Elena Rome
Italy


Sara Donzelli
Translational Oncogenomics Unit
National Cancer Institute Regina Elena Rome
Italy


Sara Santos
Institute for Biotechnology and Bioengineering
Centre of Genomics and Biotechnology
University of Trás-os-Montes and Alto Douro (IBB/CGB-UTAD)
Vila Real
Portugal


Susan S. Kim
Department of Physiology, Faculty of Medicine
University of Toronto Centre for the Study of Pain
1 King’s College Circle
Toronto
Ontario
Canada


Tissa T. Manavalan
Department of Biochemistry & Molecular Biology
Center for Genetics and Molecular Medicine
University of Louisville School of Medicine
Louisville
KY, 40292
USA


Véronique Brault
Institute of Molecular Genetics and Cell Biology (IGBMC)
INSERM U964, CNRS UMR7104
University of Strasbourg
Illkirch
France


Xinkun Wang
Higuchi Biosciences Center and Department of Pharmacology and Toxicology
The University of Kansas
Lawrence
KS, 66047
USA


Yann Hérault
Institute of Molecular Genetics and Cell Biology (IGBMC)
INSERM U964, CNRS UMR7104
University of Strasbourg
Illkirch
France
/
Institute Clinic Souris (ICS), IEFERM U964
CNRS UMR7104
University of Strasbourg
Illkirch
France


Yuh-Hwa Wang
Department of Biochemistry
Wake Forest School of Medicine
Medical Center Boulevard
Winston-Salem
NC, 27157-1016
USA




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